diff options
| author | Hui Lan <lanhui@zjnu.edu.cn> | 2025-04-09 16:27:11 +0800 |
|---|---|---|
| committer | Hui Lan <lanhui@zjnu.edu.cn> | 2025-04-09 16:27:11 +0800 |
| commit | 933a7f22297873d114704d6ed0d34ac9eb012a0a (patch) | |
| tree | 5e0f2024c7dc366438702d1bd23723922f75590d /Code | |
| parent | 75ec1d1e8c10fec0d4a29029fe0e35813271e020 (diff) | |
Run this file from time to time to get the most recent RNA-Seq records at ENA
Diffstat (limited to 'Code')
| -rw-r--r-- | Code/download_ena_records.py | 12 |
1 files changed, 12 insertions, 0 deletions
diff --git a/Code/download_ena_records.py b/Code/download_ena_records.py new file mode 100644 index 0000000..0f0cf30 --- /dev/null +++ b/Code/download_ena_records.py @@ -0,0 +1,12 @@ +accession = 3702 +types = ['read_run', 'read_expriment', 'sample', 'study'] + +for t in types: + url = f'https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession={accession}&result={t}' + print(url) + + +#https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession=3702&result=read_run +#https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession=3702&result=read_experiment +#https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession=3702&result=sample +#https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession=3702&result=study |