From 933a7f22297873d114704d6ed0d34ac9eb012a0a Mon Sep 17 00:00:00 2001 From: Hui Lan Date: Wed, 9 Apr 2025 16:27:11 +0800 Subject: Run this file from time to time to get the most recent RNA-Seq records at ENA --- Code/download_ena_records.py | 12 ++++++++++++ 1 file changed, 12 insertions(+) create mode 100644 Code/download_ena_records.py (limited to 'Code') diff --git a/Code/download_ena_records.py b/Code/download_ena_records.py new file mode 100644 index 0000000..0f0cf30 --- /dev/null +++ b/Code/download_ena_records.py @@ -0,0 +1,12 @@ +accession = 3702 +types = ['read_run', 'read_expriment', 'sample', 'study'] + +for t in types: + url = f'https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession={accession}&result={t}' + print(url) + + +#https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession=3702&result=read_run +#https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession=3702&result=read_experiment +#https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession=3702&result=sample +#https://www.ebi.ac.uk/ena/browser/api/xml/links/taxon?accession=3702&result=study -- cgit v1.2.1