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Diffstat (limited to 'Code')
| -rw-r--r-- | Code/merge_edges.py | 4 |
1 files changed, 3 insertions, 1 deletions
diff --git a/Code/merge_edges.py b/Code/merge_edges.py index d07447a..a2da07f 100644 --- a/Code/merge_edges.py +++ b/Code/merge_edges.py @@ -151,14 +151,16 @@ def make_new_edge(lst_tuple): best_edge[9] = ','.join(sorted(list(set(method_or_tissue)))) # unique methods or tissues, in string format return best_edge - + ##main + d = {} # d will contain all edges computed so far, where the key is TargetGeneID_TFGeneID, and the value is a list of tuples. Each tuple is a historical edge. file_count = 0 for fname in sorted(glob.glob(os.path.join(EDGE_POOL_DIR, 'edges*.*'))): file_count += 1 print('[merge_edges.py]: including %s.' % (fname)) + write_log_file('[merge_edges.py] including file %s.' % (fname) , UPDATE_NETWORK_LOG_FILE) f = open(fname) for line in f: |