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| author | Hui Lan <lanhui@zjnu.edu.cn> | 2021-07-27 21:38:50 +0800 |
|---|---|---|
| committer | Hui Lan <lanhui@zjnu.edu.cn> | 2021-07-27 22:16:34 +0800 |
| commit | e5869e2ac0fdd1feb7503001d0100702d0d75250 (patch) | |
| tree | cc6b5e42ce70a979a7a0f3bb35d6c2a03f65ebcc /Code | |
| parent | 340ce87919897a6c37c95132194c02cf7853a716 (diff) | |
configure.py: double daily downloads.
Diffstat (limited to 'Code')
| -rw-r--r-- | Code/configure.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/Code/configure.py b/Code/configure.py index b7cb1c9..b2425fb 100644 --- a/Code/configure.py +++ b/Code/configure.py @@ -6,7 +6,7 @@ SALMON_MAP_RESULT_DIR = '../Data/temp/salmon_map_result' KMER = 31
# From download_and_map.py
-DAILY_MAP_NUMBER = 2 # download this many samples each time. I have tested the values of 3, 4, 5, 8.
+DAILY_MAP_NUMBER = 4 # download this many samples each time. I have tested the values of 3, 4, 5, 8.
MIN_FASTQ_FILE_SIZE = 200000000 # in bytes, approximately 200MB
RNA_SEQ_INFO_FILE = '../Data/information/rnaseq_info_database.json' # some data downloaded from ENA are not RNA-seq (they are ChIP-seq). Use this file to tell whether the file is RNA-seq
DOWNLOADED_SRA_ID_LOG_FILE = '../Data/log/download_log.txt' # a list of downloaded SRA IDs
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