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| author | Hui Lan <lanhui@zjnu.edu.cn> | 2022-10-09 14:11:01 +0800 |
|---|---|---|
| committer | Hui Lan <lanhui@zjnu.edu.cn> | 2022-10-09 14:11:01 +0800 |
| commit | 8057467f9547afc07339a36cd2c05c170faffb3a (patch) | |
| tree | 2dff55a9d2b17f017acfac70fb7e88075ad2350a /Code/configure.py | |
| parent | ff5064e879ecba67f21da63b49982fc4060f8ec3 (diff) | |
Shorten config variable name, remove 'PARAMETER_FOR_'
Diffstat (limited to 'Code/configure.py')
| -rw-r--r-- | Code/configure.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/Code/configure.py b/Code/configure.py index 825cedc..3442bd4 100644 --- a/Code/configure.py +++ b/Code/configure.py @@ -33,7 +33,7 @@ PARAMETER_FOR_NET_WIGGELAB_DIURNAL = '../Data/parameter/parameter_for_net_wig BINDING_FILE = '../Data/history/bind/binding.txt'
TPM_FILE = '../Data/history/expr/TPM.txt' # gene expression data
-PARAMETER_FOR_BUILDRMATRIX_RENEW_INTERVAL = 18 # check every 18 days for updating TPM.txt
+BUILDRMATRIX_RENEW_INTERVAL = 1 # check every 18 days for updating TPM.txt
MIN_RNA_SEQ_INCREASE = -10000 # minimum RNA-seq experiments needed when updating parameter_for_buildRmatrix.txt
UPDATE_NETWORK_LOG_FILE = '../Data/log/update.network.log.txt' # network update log. We should check this file from time to time.
NEW_OR_UPDATED_CHIP_FILE = '../Data/log/new.or.updated.chip.file.txt'
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