From 8057467f9547afc07339a36cd2c05c170faffb3a Mon Sep 17 00:00:00 2001 From: Hui Lan Date: Sun, 9 Oct 2022 14:11:01 +0800 Subject: Shorten config variable name, remove 'PARAMETER_FOR_' --- Code/configure.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) (limited to 'Code/configure.py') diff --git a/Code/configure.py b/Code/configure.py index 825cedc..3442bd4 100644 --- a/Code/configure.py +++ b/Code/configure.py @@ -33,7 +33,7 @@ PARAMETER_FOR_NET_WIGGELAB_DIURNAL = '../Data/parameter/parameter_for_net_wig BINDING_FILE = '../Data/history/bind/binding.txt' TPM_FILE = '../Data/history/expr/TPM.txt' # gene expression data -PARAMETER_FOR_BUILDRMATRIX_RENEW_INTERVAL = 18 # check every 18 days for updating TPM.txt +BUILDRMATRIX_RENEW_INTERVAL = 1 # check every 18 days for updating TPM.txt MIN_RNA_SEQ_INCREASE = -10000 # minimum RNA-seq experiments needed when updating parameter_for_buildRmatrix.txt UPDATE_NETWORK_LOG_FILE = '../Data/log/update.network.log.txt' # network update log. We should check this file from time to time. NEW_OR_UPDATED_CHIP_FILE = '../Data/log/new.or.updated.chip.file.txt' -- cgit v1.2.1