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import os, operator, sys
def make_dict(fname):
f = open(fname)
gene_dict = {}
target_dict = {}
tf_dict = {}
edge_dict = {}
for line in f:
line = line.strip()
lst = line.split('\t')
target = lst[0].split()[0].upper()
tf = lst[1].split()[0].upper()
if not tf in tf_dict:
tf_dict[tf] = 1
else:
tf_dict[tf] += 1
if not target in target_dict:
target_dict[target] = 1
else:
target_dict[target] += 1
if not tf in gene_dict:
gene_dict[tf] = 1
else:
gene_dict[tf] += 1
if not target in gene_dict:
gene_dict[target] = 1
else:
gene_dict[target] += 1
k = tf + '.' + target
if not k in edge_dict:
edge_dict[k] = 1
else:
edge_dict[k] += 1
f.close()
return tf_dict, target_dict, gene_dict, edge_dict
# main
edge_fname = '/home/hui/network/v03/Data/history/edges/edges.txt'
tf_dict, target_dict, gene_dict, edge_dict = make_dict(edge_fname)
print('Number of TFs: %d' % len(tf_dict))
print('Number of targets: %d' % len(target_dict))
print('Number of genes: %d' % len(gene_dict))
print('Number of edges: %d' % len(edge_dict))
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