summaryrefslogtreecommitdiff
AgeCommit message (Expand)Author
2020-05-03download_and_map.py: when download_log.txt contains blank lines, this script ...Hui Lan
2020-05-03configure.py: fewer daily downloadsHui Lan
2020-05-02download_and_map.py: lower the requirement of available disk space to make do...Hui Lan
2020-04-04Modified .gitignoreHui Lan
2020-04-04Modified .gitignoreHui Lan
2020-03-27update_network_by_force.py: the number of %s should be the same as the number...Hui Lan
2020-03-27html_network.py: string like 'F3'H' will cause syntax error in JavaScript. js...Hui Lan
2020-03-27html_network.py: string like 'F3'H' will cause syntax error in JavaScript.Hui Lan
2020-03-27update_network_by_force.py: code for build table of regulators and regulatees.Hui Lan
2020-03-26html_network.py: don't show intermediate resultHui Lan
2020-03-26html_network.py: remove many lines to make it simplerHui Lan
2020-02-15merge_edges.py: remove old function make_new_edge()Hui Lan
2020-02-15update_network_by_force.py: enable visiting the web app each time the network...Hui Lan
2020-02-15merge_edges.py: now db_fname has a place to printHui Lan
2020-02-15merge_edges.py: an integer in a list prevents the join method from workingHui Lan
2020-02-15update_network_by_force.py: disable visiting the web app each time when runni...Hui Lan
2020-02-15merge_edges.py: a more memory efficient method to compute an edge's net strengthHui Lan
2020-02-15merge_edges.py: do not show edge file names in network.logHui Lan
2020-02-15merge_edges.py: datetime.now() dose not work. Should be datetime.datetime.now()Hui Lan
2020-02-14merge_edges.py: write edge file names to network.logHui Lan
2020-02-11merge_edges.py: use the most recent update date as the merged edge's date.Hui Lan
2020-02-11merge_edges.py: add a few comments for function make_new_edge.Hui Lan
2020-02-11merge_edges.py: log more information in network.log.Hui Lan
2020-02-11merge_edges.py: log number of edge files scanned.Hui Lan
2020-02-11merge_edges.py: what is the purpose of variable d.Hui Lan
2020-02-11merge_edges.py: make a better keyHui Lan
2020-02-11merge_edges.py: why 10?Hui Lan
2020-02-11merge_edges.py: consider all files in directory EDGE_POOL whose file name sta...Hui Lan
2020-02-06backup_files.py: remove the cd command - we do not need to cd to a directory ...Hui Lan
2020-02-06backup_files.py: fix misspellingHui Lan
2020-01-21update_network_by_force.py: update G.pickle and SOURCE_NODES.pickle with edge...Hui Lan
2020-01-21merge_edges.py: write all edge information to an SQLite database file called ...Hui Lan
2020-01-18download_and_map.py: write "no enough space" warning message to network log fileHui Lan
2019-12-26merge_edges.py: save memory by removing the dictionary variable duniqHui Lan
2019-12-12update_network_by_force.py: summarize the association strength in the edge fileHui Lan
2019-12-07create backup_files.py for backing up filesHui Lan
2019-12-06draw_subnetwork.py: add a known network (G0) from the thermomorphogenesis paper.Hui Lan
2019-12-05draw_subnetwork.py for generating a subnetwork consisting of genes that might...Hui Lan
2019-12-05add count_AGI_in_cDNA.py for counting number of unique genes in a cdna file.Hui Lan
2019-12-04merge_edges.py: run dos2unix on merge_edges.py to remove ^M characters.Hui Lan
2019-12-04merge_edges.py: clean up source code by removing commented lines and editing ...Hui Lan
2019-12-04brain: add python and R code to local repository.Hui Lan