diff options
Diffstat (limited to 'Code')
| -rw-r--r-- | Code/buildRmatrix.py | 5 |
1 files changed, 4 insertions, 1 deletions
diff --git a/Code/buildRmatrix.py b/Code/buildRmatrix.py index 4557993..363e0a3 100644 --- a/Code/buildRmatrix.py +++ b/Code/buildRmatrix.py @@ -115,7 +115,10 @@ def save_TPM_table(gene_lst, dict_lst, fname): for g in gene_lst:
s = g
for d in dict_lst:
- v = get_max_expressed_isoform_save_space(g, d)
+ if g in d['isoform']:
+ v = d['isoform'][g]
+ else:
+ v = '-9'
total_count += 1
if v != '-9':
s += '\t' + v
|