1 files changed, 4 insertions, 1 deletions
diff --git a/Code/buildRmatrix.py b/Code/buildRmatrix.py
index 4557993..363e0a3 100644
--- a/Code/buildRmatrix.py
+++ b/Code/buildRmatrix.py
@@ -115,7 +115,10 @@ def save_TPM_table(gene_lst, dict_lst, fname):
     for g in gene_lst:
         s = g
         for d in dict_lst:
-            v = get_max_expressed_isoform_save_space(g, d)
+            if g in d['isoform']:
+                v = d['isoform'][g]
+            else:
+                v = '-9'
             total_count += 1
             if v != '-9':
                 s += '\t' + v