diff options
Diffstat (limited to 'Code/update_network.py')
| -rwxr-xr-x | Code/update_network.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/Code/update_network.py b/Code/update_network.py index 13e1c11..542cbdf 100755 --- a/Code/update_network.py +++ b/Code/update_network.py @@ -51,7 +51,7 @@ from configure import HISTORY_DIR, HISTORY_DIR2, FILE_TIMESTAMP, SAMPLE_SIZE_FIL PARAMETER_FOR_BUILDCMATRIX, PARAMETER_FOR_BUILDRMATRIX, \ PARAMETER_FOR_NET, PARAMETER_FOR_NET_TRAVADB_STRESS, PARAMETER_FOR_NET_TRAVADB_MAP, PARAMETER_FOR_NET_MILD_DROUGHT, PARAMETER_FOR_NET_WIGGELAB_DIURNAL, \ BINDING_FILE, TPM_FILE, \ - PARAMETER_FOR_BUILDRMATRIX_RENEW_INTERVAL, MIN_RNA_SEQ_INCREASE, UPDATE_NETWORK_LOG_FILE, NEW_OR_UPDATED_CHIP_FILE, \ + BUILDRMATRIX_RENEW_INTERVAL, MIN_RNA_SEQ_INCREASE, UPDATE_NETWORK_LOG_FILE, NEW_OR_UPDATED_CHIP_FILE, \ RNA_SEQ_INFO_DATABASE, RNA_SEQ_INFO_DATABASE_JSON, GENE_ID_FIRST_TWO_LETTERS, MEMORY_STRENGTH, \ MAPPED_RDATA_DIR, MAPPED_CDATA_DIR, \ EDGE_POOL_DIR, MERGED_EDGE_FILE, \ @@ -691,7 +691,7 @@ if 'binding.txt' in updated_file_list: ################## TPM.txt stuff ##################################### # update parameter_for_buildRmatrix.txt periodically and automatically. -if datetime.now().day % PARAMETER_FOR_BUILDRMATRIX_RENEW_INTERVAL == 0: # check if need to update parameter_for_buildRmatrix.txt bi-weekly +if datetime.now().day % BUILDRMATRIX_RENEW_INTERVAL == 0: # check if need to update parameter_for_buildRmatrix.txt bi-weekly curr_time = datetime.now().strftime('%Y%m%d%H%M') new_parameter_file = '../Data/temp/parameter_for_buildRmatrix.%s' % (curr_time) cmd = 'python3 make_parameter_rnaseq.py > %s' % (new_parameter_file) # new_parameter_file will not be updated unless download_and_map.py has finished. |