Update write_log_file() so that it put the most recent message on the top; remove duplicate write_log_file()

1 files changed, 1 insertions, 9 deletions

diff --git a/Code/make_parameter_rnaseq.py b/Code/make_parameter_rnaseq.py
index 18ef568..f9c7d26 100644
--- a/Code/make_parameter_rnaseq.py
+++ b/Code/make_parameter_rnaseq.py
@@ -9,6 +9,7 @@
 import sys, os, glob, json

 import fnmatch, re

 from datetime import datetime

+from log import write_log_file

 from configure import RNA_SEQ_INFO_FILE, UPDATE_NETWORK_LOG_FILE

 

 NON_ZERO_RATIO = 0.2 # omit *_quant.txt files with too many zeros.

@@ -102,15 +103,6 @@ def read_ena_data_info_json(fname):
     return d

 

 

-def write_log_file(s, fname):

-    f = open(fname, 'a')

-    curr_time = datetime.now().strftime('%Y-%m-%d %H:%M')

-    s = '[' + curr_time + ']: ' + s

-    if not '\n' in s:

-        s += '\n'

-    f.write(s)

-    f.close()

-

 ### main

 if not os.path.exists(RNA_SEQ_INFO_FILE):

     print('make_parameter_rnaseq.py: you must provide %s. See parse_ena_xml.py on how to make it.' % (RNA_SEQ_INFO_FILE))