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| author | Hui Lan <lanhui@zjnu.edu.cn> | 2025-03-09 16:23:00 +0800 |
|---|---|---|
| committer | Hui Lan <lanhui@zjnu.edu.cn> | 2025-03-09 16:23:00 +0800 |
| commit | d6b28e7a6e11de2622988488badc7a07c662e2c4 (patch) | |
| tree | 1ce440b6e91ff0adb4a36d7d5843783ebae278c6 | |
| parent | 0070478f7f57ee86d6a0bc2d3550eb5a5e71a7ec (diff) | |
configure.py
| -rw-r--r-- | Code/configure.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/Code/configure.py b/Code/configure.py index 73fc9cc..256cf73 100644 --- a/Code/configure.py +++ b/Code/configure.py @@ -6,7 +6,7 @@ SALMON_MAP_RESULT_DIR = '../Data/temp/salmon_map_result' KMER = 31
# From download_and_map.py
-DAILY_MAP_NUMBER = 4 # download this many samples each time. I have tested the values of 3, 4, 5, 8.
+DAILY_MAP_NUMBER = 10 # download this many samples each time. I have tested the values of 3, 4, 5, 8, 9.
MIN_FASTQ_FILE_SIZE = 200000000 # in bytes, approximately 200MB
RNA_SEQ_INFO_FILE = '../Data/information/rnaseq_info_database.json' # some data downloaded from ENA are not RNA-seq (they are ChIP-seq). Use this file to tell whether the file is RNA-seq
DOWNLOADED_SRA_ID_LOG_FILE = '../Data/log/download_log.txt' # a list of downloaded SRA IDs
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