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| author | Hui Lan <lanhui@zjnu.edu.cn> | 2024-08-07 15:02:12 +0800 |
|---|---|---|
| committer | Hui Lan <lanhui@zjnu.edu.cn> | 2024-08-07 15:02:12 +0800 |
| commit | cec522c7c60771fd6da011e3e6eecb2ac607744b (patch) | |
| tree | debf697f7fe4db0dd0e093d195e855f43a2f3cae | |
| parent | 7cbaecaa81bf55dd36f985c670f5bcb038780895 (diff) | |
Important files
| -rw-r--r-- | brain.documentation/QUICKSTART.rst | 9 |
1 files changed, 9 insertions, 0 deletions
diff --git a/brain.documentation/QUICKSTART.rst b/brain.documentation/QUICKSTART.rst index 280def8..aac4411 100644 --- a/brain.documentation/QUICKSTART.rst +++ b/brain.documentation/QUICKSTART.rst @@ -1138,7 +1138,16 @@ Python3 is required too. - Salmon 0.7.2 for mapping RNA-seq data.
+Important files and directories
+-------------------------------
+- Edge pool： denoted by EDGE_POOL_DIR (/disk1/edge_pool) in configure.py
+
+- Aggregate edge file: denoted by MERGED_EDGE_FILE ('../Data/temp/edges.txt') in configure.py
+
+- Aggregate edge information in SQLite database: denoted by SQLITE_EDGE_FILE ('../Data/temp/edges.sqlite') in configure.py
+
+
Directory structure
-------------------
|