From cec522c7c60771fd6da011e3e6eecb2ac607744b Mon Sep 17 00:00:00 2001 From: Hui Lan Date: Wed, 7 Aug 2024 15:02:12 +0800 Subject: Important files --- brain.documentation/QUICKSTART.rst | 9 +++++++++ 1 file changed, 9 insertions(+) (limited to 'brain.documentation') diff --git a/brain.documentation/QUICKSTART.rst b/brain.documentation/QUICKSTART.rst index 280def8..aac4411 100644 --- a/brain.documentation/QUICKSTART.rst +++ b/brain.documentation/QUICKSTART.rst @@ -1138,7 +1138,16 @@ Python3 is required too. - Salmon 0.7.2 for mapping RNA-seq data. +Important files and directories +------------------------------- +- Edge pool： denoted by EDGE_POOL_DIR (/disk1/edge_pool) in configure.py + +- Aggregate edge file: denoted by MERGED_EDGE_FILE ('../Data/temp/edges.txt') in configure.py + +- Aggregate edge information in SQLite database: denoted by SQLITE_EDGE_FILE ('../Data/temp/edges.sqlite') in configure.py + + Directory structure ------------------- -- cgit v1.2.1