From 57366ce96686f171d429af35ca99a8458a3bf666 Mon Sep 17 00:00:00 2001 From: Hui Lan Date: Tue, 9 Feb 2021 10:56:56 +0800 Subject: update_network.py: code review. --- Code/configure.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) (limited to 'Code/configure.py') diff --git a/Code/configure.py b/Code/configure.py index 9f159c1..5e329af 100644 --- a/Code/configure.py +++ b/Code/configure.py @@ -34,8 +34,8 @@ PARAMETER_FOR_NET_WIGGELAB_DIURNAL = '../Data/parameter/parameter_for_net_wig BINDING_FILE = '../Data/history/bind/binding.txt' TPM_FILE = '../Data/history/expr/TPM.txt' # gene expression data -PARAMETER_FOR_BUILDRMATRIX_RENEW_INTERVAL = 1 # check every 28 days for updating TPM.txt -MIN_RNA_SEQ_INCREASE = 2 # minimum RNA-seq experiments needed when updating parameter_for_buildRmatrix.txt +PARAMETER_FOR_BUILDRMATRIX_RENEW_INTERVAL = 14 # check every 28 days for updating TPM.txt +MIN_RNA_SEQ_INCREASE = 60 # minimum RNA-seq experiments needed when updating parameter_for_buildRmatrix.txt UPDATE_NETWORK_LOG_FILE = '../Data/log/update.network.log.txt' # network update log. We should check this file from time to time. NEW_OR_UPDATED_CHIP_FILE = '../Data/log/new.or.updated.chip.file.txt' -- cgit v1.2.1