From c7a0dc4983c4ad3e854d3af4b9309479887602b7 Mon Sep 17 00:00:00 2001 From: Lan Hui Date: Tue, 13 May 2025 18:14:36 +0800 Subject: Fix SyntaxWarning error --- Code/make_parameter_rnaseq.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Code/make_parameter_rnaseq.py b/Code/make_parameter_rnaseq.py index e7b971e..2eb36ce 100644 --- a/Code/make_parameter_rnaseq.py +++ b/Code/make_parameter_rnaseq.py @@ -33,7 +33,7 @@ def extract_id(s, src): libno = filter(str.isdigit, parent_dir) # extrac library number libno = libno.zfill(3) sample_no = os.path.basename(s) # extract sample number - first_match = re.findall('_S\d+_', sample_no)[0] + first_match = re.findall(r'_S\d+_', sample_no)[0] sample_no = filter(str.isdigit, first_match).zfill(2) return '0000' + libno + sample_no if src == 'sra': -- cgit v1.2.1