From 7b2e32f7d8d2446590a911fd784dbd411cde9a6b Mon Sep 17 00:00:00 2001 From: Lan Hui Date: Tue, 10 Jun 2025 14:45:51 +0800 Subject: Remove not real tissue type: 'not collected' --- Code/parse_ena_xml.py | 2 ++ 1 file changed, 2 insertions(+) diff --git a/Code/parse_ena_xml.py b/Code/parse_ena_xml.py index 4d8dc1d..131670c 100644 --- a/Code/parse_ena_xml.py +++ b/Code/parse_ena_xml.py @@ -329,6 +329,8 @@ def parse_experiment(fname): def clean_tissue_info(tissue_type): if 'not provided' in tissue_type: return '' + if 'not collected' in tissue_type: + return '' if 'seedings' in tissue_type: # a typo I guess return 'seedlings' if 'rootstock' in tissue_type: -- cgit v1.2.1