From 4a51e32e378dcebcacc8a5d5abeb6983ebe4c817 Mon Sep 17 00:00:00 2001 From: Hui Lan Date: Mon, 4 May 2020 12:34:09 +0800 Subject: merge_edges.py: rename make_new_edge2. Remove 2. --- Code/merge_edges.py | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/Code/merge_edges.py b/Code/merge_edges.py index 842b27f..bf3bf5b 100644 --- a/Code/merge_edges.py +++ b/Code/merge_edges.py @@ -128,7 +128,7 @@ def get_unique_cids(lst): return ' '.join(result) -def make_new_edge2(d): +def make_new_edge(d): best_edge = list(d['best_edge']) S = 365 * 10 curr_date = datetime.datetime.now().strftime('%Y%m%d') @@ -209,7 +209,7 @@ if not os.path.isdir(folder_path): write_log_file('[merge_edges.py]: Make text edge file %s ...' % (MERGED_EDGE_FILE), UPDATE_NETWORK_LOG_FILE) fout = open(MERGED_EDGE_FILE, 'w') for k in d: - lst = make_new_edge2(d[k]) + lst = make_new_edge(d[k]) fout.write('\t'.join(lst) + '\n') fout.close() @@ -225,7 +225,7 @@ conn = sqlite3.connect(db_fname) c = conn.cursor() c.execute('CREATE TABLE IF NOT EXISTS edge (target_id text, target_name text, tf_id text, tf_name text, strength text, date text, method text, evidence text)') for k in d: - lst = make_new_edge2(d[k]) + lst = make_new_edge(d[k]) # Make an html page for each edge (taking Big disk space). This will take about 5GB disk space # for 1.3 million edges, not very disk space friendly. So I use a database-driven dynamic method # to save space. -- cgit v1.2.1