Age | Commit message (Collapse) | Author | |
---|---|---|---|
11 days | Maintenance | Hui Lan | |
2025-04-06 | Show number of remaining RNA-Seq data to reflect remaining work | Hui Lan | |
2025-04-02 | Reverse download log lines and write them to a new file ↵ | Hui Lan | |
download_log_reversed.txt so that the most recent log line appears on the top. Purpose: easier to check log from the web browser. | |||
2025-03-09 | Kill wget if it takes too long | Hui Lan | |
2025-03-09 | Append DONE to the download log in case the downloading process cannot move ↵ | Hui Lan | |
on. Added two helper functions: age_of_file_in_hours() and append_done(). Ran dos2unix; that is why there are so many changes. | |||
2022-10-07 | Change the place used to store downloaded raw RNASeq data. | Hui Lan | |
2021-02-10 | download_and_map.py: fix name d not defined error. | Hui Lan | |
2021-02-10 | download_and_map.py: remove function read_ena_data_info() as it is no longer ↵ | Hui Lan | |
used. | |||
2021-02-10 | download_and_map.py: simplify function read_ena_data_info_json such that it ↵ | Hui Lan | |
includes all info. | |||
2021-02-10 | download_and_map.py: adpat this script to use the latest ↵ | Hui Lan | |
rnaseq_info_database.json file. | |||
2020-05-03 | download_and_map.py: when download_log.txt contains blank lines, this script ↵ | Hui Lan | |
will stop working. Make it work when the log file contains blank lines. These blank lines usually appear in the end of the log file. | |||
2020-05-02 | download_and_map.py: lower the requirement of available disk space to make ↵ | Hui Lan | |
downloading and mapping proceed. | |||
2020-01-18 | download_and_map.py: write "no enough space" warning message to network log file | Hui Lan | |
If there is no enough space left in the disk, download_and_map.py will refuse to download any data. This can be quite mysterious for a maintainer. So, write the reason to the network log file. The reason is something like: "[download_and_map.py] home directory does not have enough space (only 13 G available)." -Hui | |||
2019-12-04 | brain: add python and R code to local repository. | Hui Lan | |