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Diffstat (limited to 'brain.documentation/QUICKSTART.rst')
| -rw-r--r-- | brain.documentation/QUICKSTART.rst | 9 |
1 files changed, 9 insertions, 0 deletions
diff --git a/brain.documentation/QUICKSTART.rst b/brain.documentation/QUICKSTART.rst index 280def8..aac4411 100644 --- a/brain.documentation/QUICKSTART.rst +++ b/brain.documentation/QUICKSTART.rst @@ -1138,7 +1138,16 @@ Python3 is required too. - Salmon 0.7.2 for mapping RNA-seq data.
+Important files and directories
+-------------------------------
+- Edge pool： denoted by EDGE_POOL_DIR (/disk1/edge_pool) in configure.py
+
+- Aggregate edge file: denoted by MERGED_EDGE_FILE ('../Data/temp/edges.txt') in configure.py
+
+- Aggregate edge information in SQLite database: denoted by SQLITE_EDGE_FILE ('../Data/temp/edges.sqlite') in configure.py
+
+
Directory structure
-------------------
|