diff options
Diffstat (limited to 'Code/slice_TPM_to_JSON.py')
| -rw-r--r-- | Code/slice_TPM_to_JSON.py | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/Code/slice_TPM_to_JSON.py b/Code/slice_TPM_to_JSON.py index e597b78..618310f 100644 --- a/Code/slice_TPM_to_JSON.py +++ b/Code/slice_TPM_to_JSON.py @@ -127,7 +127,7 @@ def make_json_file(expr_dict, dir_name, glb_param_dict): def make_json_file_using_r(dir_name, glb_param_dict): # use r script to make it faster r_code = ''' - library(rjson) + library(jsonlite) dir.name <- '%s' tpm.file <- '%s' take.log <- '%s' @@ -141,7 +141,7 @@ def make_json_file_using_r(dir_name, glb_param_dict): # use r script to make it dir.create(dir.name) } for (i in 1:dim(X)[1]) { - y <- toJSON(X[i,]) + y <- toJSON(X[i,], digits=I(3)) file.name = paste(dir.name, paste(gene.id[i], 'json', sep='.'), sep='/') cat(y, file=file.name) } |