diff options
| -rw-r--r-- | Code/download_ena_experiment_records.py | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/Code/download_ena_experiment_records.py b/Code/download_ena_experiment_records.py index d96071f..14a4a96 100644 --- a/Code/download_ena_experiment_records.py +++ b/Code/download_ena_experiment_records.py @@ -17,6 +17,7 @@ import urllib.request import os, time, glob +from parse_ena_xml import parse_experiment def get_xml_for_experiment_id(eid): url = 'https://www.ebi.ac.uk/ena/browser/api/xml/%s' % (eid) @@ -41,4 +42,7 @@ if __name__ == '__main__': fname = os.path.join(experiment_info_dir, experiment_id) with open(fname, 'w', encoding='utf-8') as f2: f2.write(xml_content) + d = parse_experiment(fname) + print(d[experiment_id]['library_strategy']) + print(d[experiment_id]['library_source']) time.sleep(6) |