summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorLan Hui <lanhui@zjnu.edu.cn>2025-06-10 14:45:51 +0800
committerLan Hui <lanhui@zjnu.edu.cn>2025-06-10 14:45:51 +0800
commit7b2e32f7d8d2446590a911fd784dbd411cde9a6b (patch)
treec7ebe7e4730fc2544d49f18fd261fde7dfb9f907
parent5104dd7d301adbb1bc49f3fd0f384b6cffc1e591 (diff)
Remove not real tissue type: 'not collected'HEADmaster
-rw-r--r--Code/parse_ena_xml.py2
1 files changed, 2 insertions, 0 deletions
diff --git a/Code/parse_ena_xml.py b/Code/parse_ena_xml.py
index 4d8dc1d..131670c 100644
--- a/Code/parse_ena_xml.py
+++ b/Code/parse_ena_xml.py
@@ -329,6 +329,8 @@ def parse_experiment(fname):
def clean_tissue_info(tissue_type):
if 'not provided' in tissue_type:
return ''
+ if 'not collected' in tissue_type:
+ return ''
if 'seedings' in tissue_type: # a typo I guess
return 'seedlings'
if 'rootstock' in tissue_type: